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Stages and Other Prognostic Factors of Gastrointestinal Stromal Tumors
If you are diagnosed with a gastrointestinal stromal tumor (GIST), your cancer care team will try to figure out if it has spread, and if so, how far. This process is called staging.
The stage of a cancer describes how much cancer is in the body. It helps determine how serious the cancer is and how best to treat it.
How are gastrointestinal stromal tumors staged?
The AJCC staging system gives a detailed summary of how far a GIST has spread. But for treatment purposes, doctors are often more concerned about whether the tumor can be resected (removed) completely with surgery.
Resectable or unresectable
Whether a tumor is resectable depends on its size, location, if it has spread to other parts of the body, and if a person is healthy enough for surgery:
- Tumors that can clearly be removed without causing major health problems are defined as resectable.
- Tumors that can’t be removed completely, because they have spread or for other reasons, are described as unresectable.
- In some cases, doctors might describe a tumor as marginally resectable or borderline resectable if it’s not clear if it can be removed completely.
If a tumor is considered unresectable or marginally resectable when it is first found, targeted therapy might be used first to try to shrink the tumor enough to make it resectable.
The AJCC TNM staging system
The staging system most often used for GIST tumors is the American Joint Committee on Cancer (AJCC) TNM system.
This staging system is based on 4 key pieces of information:
- Size of the primary tumor (T) describes the size of the main tumor.
- Spread to lymph nodes (N) describes the extent of spread to nearby (regional) lymph nodes. GISTs rarely spread to the lymph nodes.
- Metastasis (M) indicates if cancer has spread to other parts of the body. The most common sites of spread are the liver, bones, lungs, and the tissue layers lining the inside of the abdomen.
- Mitotic rate is a lab test measurement of how fast the cancer cells are growing and dividing. It is described as either low or high. A low mitotic rate predicts a better outcome.
Numbers or letters after T, N, and M provide more details about each of these factors. Higher numbers mean the cancer is more advanced.
Stage grouping
Once a person’s T, N, and M categories have been determined, this information is combined in a process called stage grouping to assign an overall stage.
Although the T, N, and M categories are the same for all GISTs, there are 2 different stage grouping schemes, depending on where the cancer starts:
- The stomach or the omentum (an apron-like layer of fatty tissue that hangs over the organs in the abdomen)
- The small intestine, esophagus, colon, rectum, or peritoneum (a layer of tissue that lines the organs and walls of the abdomen).
This is because GISTs that start in the stomach or omentum are typically less likely to grow and spread to other parts of the body than GISTs starting in other locations.
The stages for GISTs range from I through IV. As a rule, the lower the number, the less the cancer has spread.
Although each person’s cancer experience is unique, cancers with similar stages tend to have a similar outlook and are often treated in much the same way.
Cancer staging can be complex, so ask your doctor to explain it to you in a way you understand.
The TNM staging system is not meant to be used for GISTs in children (pediatric GIST) or GISTs that are the result of inherited genetic syndromes.
GIST that starts in the stomach or the omentum
IA
Stage grouping: T1-2, N0, M0
Mitotic rate: Low
The tumor is:
- No more than 2 cm across (T1) OR
- Larger than 2 cm but not more than 5 cm across (T2).
The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
IB
T3, N0, M0
Mitotic rate: Low
The tumor is larger than 5 cm but not more than 10 cm across (T3). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
T1, N0, M0
Mitotic rate: High
The tumor is no more than 2 cm across (T1). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
OR
T2, N0, M0
Mitotic rate: High
The tumor is larger than 2 cm, but not more than 5 cm across (T2). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
OR
T4, N0, M0
Mitotic rate: Low
The tumor is larger than 10 cm across (T4). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
IIIA
T3, N0, M0
Mitotic rate: High
The tumor is larger than 5 cm but not more than 10 cm across (T3). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
IIIB
T4, N0, M0
Mitotic rate: High
The tumor is larger than 10 cm across (T4). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
Any T, N1, M1
Mitotic rate: low or high
The tumor is any size (Any T) AND it has spread to nearby lymph nodes (N1). The cancer has not spread to distant sites (M0).
Any T, Any N, M1
Mitotic rate: low or high
The tumor is any size (Any T) AND it may or may not have spread to nearby lymph nodes (Any N). The cancer has spread to distant parts of the body (M1).
GIST of the small intestine, esophagus, colon, rectum, mesentery or peritoneum
Stage grouping: T1-2, N0, M0
Mitotic rate: Low
The tumor is:
- No more than 2 cm across (T1) OR
- Larger than 2 cm but not more than 5 cm across (T2).
The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
T3, N0, M0
Mitotic rate: Low
The tumor is larger than 5 cm but not more than 10 cm across (T3). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
IIIA
T1, N0, M0
Mitotic rate: High
The tumor is no more than 2 cm across (T1). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
OR
T4, N0, M0
Mitotic rate: Low
The tumor is larger than 10 cm across (T4). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
IIIB
T2, N0, M0
Mitotic rate: High
The tumor is larger than 2 cm but not more than 5 cm across (T2). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
OR
T3, N0, M0
Mitotic rate: High
The tumor is larger than 5 cm but not more than 10 cm across (T3). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
OR
T4, N0, M0
Mitotic rate: High
The tumor is larger than 10 cm across (T4). The cancer has not spread to nearby lymph nodes (N0) or to distant sites (M0).
Any T, N1, M1
Mitotic rate: low or high
The tumor is any size (Any T) AND it has spread to nearby lymph nodes (N1). The cancer has not spread to distant sites (M0).
OR
Any T, Any N, M1
Mitotic rate: low or high
The tumor is any size (Any T) AND it may or may not have spread to nearby lymph nodes (Any N). The cancer has spread to distant parts of the body (M1).
*The following additional categories are not listed above:
- TX: Main (primary) tumor cannot be assessed due to lack of information.
- T0: No evidence of a main (primary) tumor.
- NX: Regional lymph nodes cannot be assessed due to lack of information.
**2 cm = almost 1 inch; 5 cm = about 2 inches; 10 cm = about 4 inches
Other ways to determine treatment options and outlook
Other factors can also affect treatment options and outlook (prognosis).
For resectable GISTs, doctors can use prediction tools to get an idea of how likely a GIST is to grow and spread to other parts of the body, or to return (recur) after surgery. This can help inform which treatment they recommend. These tools use factors such as:
- Where the tumor starts
- The size of the tumor
- The mitotic rate
- Whether or not the tumor has ruptured
- Certain characteristics on imaging tests
Testing for changes in the KIT or PDGFR2A genes, which often drive the growth of GISTs, is becoming more common. This information can help determine whether the cancer might respond to treatment with targeted therapy drugs.
- Written by
- References
Developed by the American Cancer Society medical and editorial content team with medical review and contribution by the American Society of Clinical Oncology (ASCO).
American Joint Committee on Cancer. Gastrointestinal Stromal Tumor. In: AJCC Cancer Staging Manual. 8th ed. New York, NY: Springer; 2017:523-529.
National Cancer Institute. Gastrointestinal Stromal Tumors Treatment. Accessed at https://www.cancer.gov/types/soft-tissue-sarcoma/hp/gist-treatment-pdq on December 4, 2025.
National Comprehensive Cancer Network. NCCN Clinical Practice Guidelines in Oncology: Gastrointestinal Stromal Tumors Version 1.2025 – April 17, 2025. Accessed at https://www.nccn.org/professionals/physician_gls/pdf/gist.pdf on December 4, 2025.
Raut CP, Duensing A, Keedy VL. Clinical presentation, diagnosis, and prognosis of gastrointestinal stromal tumors. UpToDate. 2025. Accessed at https://www.uptodate.com/contents/clinical-presentation-diagnosis-and-prognosis-of-gastrointestinal-stromal-tumors on December 4, 2025.
Last Revised: March 10, 2026
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